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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015891505.1_cds_XP_016446295.1_41168
CDS Infomation

[gene=LOC107771448] [db_xref=GeneID:107771448] [protein=3-hydroxyisobutyryl-CoA hydrolase-like protein 5] [protein_id=XP_016446295.1] [location=join(47361..47393,47494..47577,48130..48198,48365..48428,48522..48595,48696..48779,48867..48951,49049..49134,50913..51034,51113..51173,51254..51352,52106..52207,52289..52330,52629..52735,52851..52893)] [gbkey=CDS]
Sequence

ATGGCTCAAGAAACAGTAACCCCAGATGGAGAGGTTGTTGTGTCTGAAGAAGTTGGAAAT
GTCAGAGTGGTGACCTTAAATCGCCCCAAGCAATTGAATGTCATTTCATCCAAAGTGGTA
AAACTACTGGCAGAGAATCTGGAGAAGTGGGAGAAAGATGAGAATGCAAAACTTGTTATC
ATCAAGGGAGCTGGTCGGGCTTTTTCTGCTGGTGGGGATTTGAAAATGTTCTATGATGGC
AGGAATTCAAAGGATTCCTGCCTCGAAGTTGTTTATCGAATGTATTGGCTCTGCAATCGC
ATTCATACATATAAAAAACCCACGGTTTCTCTTGTTCATGGAATATCAATGGGTGGAGGT
GCATCCTTAATGGTTCCGATGAAGTTCTCCGTCGTGACAGAAAAGACAGTTTTTTCAACT
CCTGAAGCAAGTATAGGCTTCCATACGGACTGTAGTTTCTCATACATTCTTTCTCGGCTT
CCTGGTAGATTGGGGGAATACTTGGGGTTAACAGGAGCGAGGCTGAATGGTAAAGAGTTG
GTTGCTGCTGGACTTGCAACACATTTTGTCCCTTTGGAGAAACTGCCGGAGCTAGAAAAG
CACTTATTAAGCTTAAACACTGGCGACGAGGCTGTTGTCAGTTCTGCAATCAAGGAGTTC
TCAACCGATGTTCAGATCGATGAAGAAAGTGTCTTAAAAAAGCAGGCAATAATTGATGAG
TGCTTCTCCAAGGATTCTGTTGCAGAGATTATTAGTTCATTCGAAGCTGAGGCAGGCAAA
GAAGGAAACAGCTGGATCGTGCCGGTGCTTAAAGGCCTAAAAAGATCATCCCCGGCAGGA
CTAAAAATTACTCTAAGATCGATTCGGGAAGGGAGGAAGCAAACTTTGTCTGAAAGTCTG
AAGAAAGAATTCAGACTTACAATCAATATACTAAGAGCAAGAATATCTGGTGATGTCTAT
GAGGGTATCAGGGCTCTTACCATTGACAAGGATAACTCTCCAAAATGGGACCCCCCGACT
CTTGAAAAGTTGGACGATGAACGAGTCAACCTCGTCTTTGAGCCATTTGAAGAAGATTTG
GAGCTCAATATTCCAGAAAATGAACAGTGCAGGTGGGATGGAAAATATGAGGATTCAGCA
TATTGCCATCAGTGA

Peptide Sequence

PEP ID

XP_016446295.1
PEP Infomation

PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase-like protein 5 [Nicotiana tabacum]
Sequence

MAQETVTPDGEVVVSEEVGNVRVVTLNRPKQLNVISSKVVKLLAENLEKWEKDENAKLVI
IKGAGRAFSAGGDLKMFYDGRNSKDSCLEVVYRMYWLCNRIHTYKKPTVSLVHGISMGGG
ASLMVPMKFSVVTEKTVFSTPEASIGFHTDCSFSYILSRLPGRLGEYLGLTGARLNGKEL
VAAGLATHFVPLEKLPELEKHLLSLNTGDEAVVSSAIKEFSTDVQIDEESVLKKQAIIDE
CFSKDSVAEIISSFEAEAGKEGNSWIVPVLKGLKRSSPAGLKITLRSIREGRKQTLSESL
KKEFRLTINILRARISGDVYEGIRALTIDKDNSPKWDPPTLEKLDDERVNLVFEPFEEDL
ELNIPENEQCRWDGKYEDSAYCHQ

Transcript Sequence

Gene sequence data has not been registered.